4/1/2023 0 Comments Chinese monal![]() Treangen TJ, Salzberg SL (2012) Repetitive DNA and next-generation sequencing: computational challenges and solutions. McCombie WR, McPherson JD, Mardis ER (2019) Next-generation sequencing Technologies. Mol Ecol Resour 8:103–106įischer MC, Foll M, Excoffier L, Heckel G (2011) Enhanced AFLP genome scans detect local adaptation in high-altitude populations of a small rodent ( Microtus arvalis). Rousset F (2008) Genepop’007: a complete re-implementation of the genepop software for Windows and Linux. ![]() Kalinowski ST, Taper ML, Marshall TC (2007) Revising how the computer program cervus accommodates genotyping error increases success in paternity assignment. Population genetic software for teaching and research-an update. Peakall R, Smouse PE (2012) GenAlEx 6.5: genetic analysis in Excel. ![]() Skwarek E, Gładysz–Płaska A, Bolbukh Y (2017) Adsorption of Uranyl Ions at the Nano-hydroxyapatite and its modification. Bioinformatics 27:2957–2963īeier S, Thiel T, Münch T, Scholz U, Mascher M (2017) MISA-web: a web server for microsatellite prediction. Magoč T, Salzberg SL (2011) FLASH: fast length adjustment of short reads to improve genome assemblies. Mol Biol Rep 47:727–729įernandes GA, Dobkowski-Marinho S, Santos VF, Lima-Rezende CA, da Silva HE et al (2019) Development and characterization of novel microsatellite loci for the Blue-fronted Amazon ( Amazona aestiva, Psittaciformes, Aves) and cross-species amplification for other two threatened Amazona species. Hou M, Du G-z, Zhao Z-g (2020) Development of genomic microsatellite markers for Aconitum gymnandrum ( Ranunculaceae) by next generation sequencing (NGS). Miah G, Rafii MY, Ismail MR, Puteh AB, Rahim HA et al (2013) A review of microsatellite markers and their applications in rice breeding programs to Improve Blast Disease Resistance. Mitochondrial DNA 21:5–7Ĭui K, Li W, James JG, Peng C, Jin J et al (2019) The first draft genome of Lophophorus: a step forward for Phasianidae genomic diversity and conservation. Ma LL, Zhang XY, Yue BS, Ran JH (2010) Complete mitochondrial genome of the chinese Monal pheasant Lophophorus lhuysii, with phylogenetic implication in Phasianidae. He F, Lu T, Lu C, Cui X (1986) Study on the breeding ecology of chinese monal. Liu Q, Chen D, Zhang L, Wang B, Chen L et al (2021) Artificial breeding of Captive Chinese Monals ( Lophophorus lhuysii) in the Fengtongzhai National Nature Reserve, Sichuan Province. Zhan X, Zhang Z, Wu A, Tao Y (2003) Phylogenetic relationships of monal pheasants Lophophorus inferred from sequences of mitochondrial cytochrome b gene. ![]() Li Z, Tang Z, Xu Y, Wang Y, Duan Z et al (2021) Habitat Use and activity patterns of mammals and birds in relation to temperature and vegetation cover in the Alpine Ecosystem of Southwestern China with Camera-Trapping monitoring. Available at (accessed on November 2018)ĬITES (2018) Convention on International Trade in Endangered Species of Wild Fauna and Flora (CITES) Appendices I, II and III. IUCN (2018) IUCN Red List of Threatened Species. International B (2016) Lophophorus lhuysii. Wang B, Xu Y, Ran J (2017) Predicting suitable habitat of the chinese monal ( Lophophorus lhuysii.) using ecological niche modeling in the Qionglai Mountains, China. ConclusionĪ combination of the seven highly polymorphic loci may provide a fundamental genetic toolkit to assess genetic backgrounds and will contribute to design conservation plan, breeding management and other possible studies of the Chinese monal and other evolutionarily related species in the future. Cross-species genome comparison further suggests that these microsatellites are a feature of certain galliform species rather than being specific to the Chinese monal. PCR examination and statistical analysis indicated that these microsatellites exhibited moderate to high levels of polymorphism, with the expected heterozygosity and polymorphic information content ranging from 0.578 to 0.858 and from 0.540 to 0.841, respectively. Methods and resultsīy using next-generation sequencing, we developed and characterized markers for seven microsatellite loci of the Chinese monal. To better protect this species and increase its population size, genetic markers are urgently needed for investigation and conservation of both wild and captive populations. The Chinese monal ( Lophophorus lhuysii, Galliformes) is a vulnerable and endemic bird from southwestern China.
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